Manuel B. Garcia

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Can Preprints and Published Versions Accidentally Be Counted Twice?

A preprint and a later journal article may be separate reports of the same underlying study. Learn how to link versions, inspect meaningful changes, and avoid treating one study as two independent pieces of evidence.

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Preprints and Published Versions Guide 282 of 899
01 · The Question

Could a Preprint and Journal Article Be the Same Study?

You find a preprint during your search. Later, you retrieve a peer-reviewed journal article with a similar research question, overlapping authors, and familiar-looking results. The title has changed, the sample size is slightly different, and several analyses have been revised. Do you have two studies?

Possibly not. PRISMA 2020 explicitly recognizes preprints and journal articles as types of reports that can provide information about an underlying study. A study can have multiple reports, so the existence of two separately accessible documents does not establish two independent investigations.

This matters in systematic reviews because accidentally treating a preprint and its subsequent journal publication as independent studies can duplicate the underlying participants and give one investigation more influence than intended.

02 · The Short Answer

Yes, Unless You Link the Versions at the Study Level

In Brief

A preprint and a subsequently published journal article can be separate reports of the same underlying study, so they should not be counted as independent studies merely because both appear in your search results.

Compare study identifiers, authors, participants, recruitment settings and dates, methods, interventions or exposures, outcomes, and version history. If they represent the same study, link them under one study record, examine what changed between versions, and use the most appropriate source for each piece of information.

03 · What You Need to Know

Why Preprints Create a Particular Duplicate-Study Problem

A Preprint and Published Article Can Be Different Reports of One Study

PRISMA 2020 distinguishes a study from the reports that communicate information about it. Its definition of a report explicitly includes both journal articles and preprints, alongside conference abstracts, study-register entries, dissertations, clinical study reports, and other documents.

This distinction is useful because a preprint and a journal publication are genuinely separate documents. They may have different titles, dates, digital object identifiers, formatting, and even substantive content. Yet they can still describe one underlying investigation.

Duplicate record Two database records refer to the same report, such as two records for the same journal article.
Multiple reports of one study Distinct documents, such as a preprint and journal article, provide information about the same underlying investigation.

Ordinary reference deduplication is designed primarily for the first problem. Study-level linkage is needed for the second.

Do Not Require an Identical Title

A manuscript can acquire a different title between preprint posting and journal publication. Authors may sharpen the framing, change terminology, or revise the emphasis during peer review and editorial processing.

Exact-title matching is therefore insufficient. Cochrane recommends using multiple study characteristics when determining whether reports belong to the same study, including study identifiers, authors, locations, interventions, sample sizes and baseline characteristics, and study dates.

Authorship Can Change Between Versions

The journal article may add or remove authors or change their order. A matching author list is helpful evidence, but it is not a necessary condition for linking reports.

Instead, look for a broader pattern. Shared investigators combined with the same participant population, recruitment period, intervention or exposure, outcome definitions, and study identifier provides much stronger evidence than authorship alone.

Sample Sizes May Change Without Creating a New Study

A preprint might report 850 participants and the journal article 812. That difference does not automatically mean the papers describe separate studies.

Changes may result from data cleaning, revised eligibility decisions, additional exclusions, updated follow-up, correction of errors, or a change in the analysis population. Conversely, recruitment may have continued after an early preprint, producing a larger final sample.

Cochrane specifically cautions that multiple reports of the same study can contain different participant numbers. Sample size is therefore one part of the study fingerprint, not a unique identifier.

Use Persistent Study Identifiers Whenever Available

Trial registration numbers, protocol identifiers, cohort names, study acronyms, ethics identifiers, grant numbers, and other study-specific identifiers can provide strong linkage evidence.

A shared trial registration number is particularly useful when titles and author lists have changed. Still, inspect the actual analysis because one version may report a subgroup, later follow-up, or other modification of the underlying study.

Check Whether the Preprint Server Links to the Published Article

Some preprint platforms display links to subsequently published versions when those relationships are known. Likewise, the journal article may cite the preprint or use a title, registration number, or protocol that connects the documents.

These explicit links can make identification straightforward. Their absence does not prove independence, however. Reports from the same study do not always cross-reference one another.

Do Not Assume the Published Version Is Numerically Identical

Peer review and revision can change analyses, tables, interpretations, participant counts, outcome definitions, and conclusions. A journal article should therefore not merely replace a preprint in your database without checking whether information used in your review has changed.

Compare the versions for features that matter to your synthesis:

Feature What to Compare Why It Matters
Participants Enrollment, exclusions, analytic sample, baseline characteristics The population behind the estimate may have changed
Methods Eligibility criteria, models, adjustment variables, missing-data procedures Analytical revisions can change the meaning of results
Outcomes Definitions, instruments, time points, primary and secondary designation The journal version may add, remove, or redefine results
Effect estimates Numerical estimates, uncertainty intervals, event counts Results may have been corrected or reanalyzed
Interpretation Claims, limitations, and conclusions Peer review may lead authors to qualify earlier interpretations
Study identifiers Registration number, protocol, cohort or project name Helps confirm that the reports belong to the same investigation

The Journal Article Will Often Be the Main Source, but Not by Automatic Rule

A later peer-reviewed article will often contain fuller and more stable reporting than an earlier preprint. That makes it a natural candidate for the main report in many reviews.

Still, publication status alone should not become an inflexible hierarchy. A preprint might contain an analysis, appendix, outcome, or methodological detail absent from the final article. Cochrane's broader principle for multiple reports is to collate them and preserve useful secondary information rather than simply discarding every source except one.

If you need to designate one main source, apply the same principles used to identify the primary report of a study.

Version Replacement and Study Deduplication Are Different Decisions

You may decide that the journal article supersedes the preprint for a particular result. That is a source-selection decision. It does not mean the preprint never existed or that its relationship to the study should disappear from your audit trail.

Keeping the reports linked lets you document why an earlier value was replaced and helps explain discrepancies encountered during extraction.

Be Particularly Careful When the Preprint and Published Article Both Enter Screening

Searches conducted across bibliographic databases, preprint servers, citation indexes, and general scholarly search platforms can retrieve both versions. If screening is performed independently at the report level without subsequent study linkage, both documents can progress through eligibility assessment as though they represented different studies.

Cochrane's MECIR standards require multiple reports of the same study to be collated so that the study, rather than each report, remains the unit of interest.

Publication Does Not Create New Participants

If a preprint reports 600 participants and its journal version reports those same 600 participants, publication in a journal does not convert the sample into another 600-person study. Even if the analysis changes, the underlying participant provenance remains relevant.

This is the same conceptual problem encountered with conference abstracts and subsequent journal publications.

Watch Out

Do not remove a preprint merely because a similar journal article exists until you have confirmed that the documents belong to the same study and checked whether consequential methods or results changed between versions.

04 · A Practical Example

When a Preprint and Journal Article Look Similar but Not Identical

Hypothetical Example

A Study Revised Before Journal Publication

Suppose your review retrieves a preprint and, several months later, a journal article.

Preprint Reports an observational study of 1,240 participants recruited from six hospitals between 2022 and 2024. It identifies the project as the CARE Study and reports an adjusted association for the review's primary outcome.
Journal article Has a different title and slightly changed author order. It reports 1,198 participants from the same six hospitals, the same recruitment period, and the CARE Study identifier.
Version comparison The published article explains additional exclusions identified during data verification and uses a revised adjusted model. The principal effect estimate changes slightly.
Decision The documents are two reports of the same underlying study, not two independent studies. The published result is used for the synthesis, while the preprint remains linked as an earlier report.

Your evidence table should therefore contain one study rather than two. The version history explains why the numerical results differ and preserves a transparent record of which estimate was ultimately used.

05 · What Researchers Often Get Wrong

Common Mistakes With Preprints and Published Versions

Misconception

A Different DOI Means a Different Study

A preprint and journal publication can have different persistent identifiers because they are different reports. Study identity depends on the underlying investigation, not whether the documents have the same DOI.

Misconception

A Changed Title Means the Papers Are Independent

Titles can change during revision and publication. Compare participants, sites, dates, methods, study identifiers, and other study-level characteristics instead of relying on title matching.

Misconception

A Different Sample Size Proves the Journal Article Is a New Study

Data cleaning, revised exclusions, continuing recruitment, missing data, or analytical changes can alter the sample size between versions. Trace where the participants came from before assuming independence.

Misconception

The Published Article Can Simply Replace the Preprint Without Comparison

The final article may revise methods or results. Compare the information relevant to your review before deciding which source should supply the extracted result, and document consequential changes.

Misconception

Reference-Manager Deduplication Will Always Detect Both Versions

A preprint and journal article are different reports and may have different titles, identifiers, dates, and bibliographic metadata. Ordinary duplicate-record detection may therefore retain both, leaving study-level linkage to the review team.

Misconception

Peer Review Turns the Published Article Into Independent Evidence

Peer review may improve or alter a report, but it does not create a new participant population. Independence depends on the underlying data and study, not on publication status.

06 · What This Means for You

Track the Version Relationship Explicitly

When a preprint and journal article appear related, compare them before final extraction. Assign both reports to the same study record when the evidence supports that relationship and document which version supplies each result used in the review.

A simple decision framework

If the preprint and article share a unique study identifier and corresponding study characteristics
Link them as reports of the same study and compare the versions for substantive changes.
If the title or authors changed but the participants, setting, dates, and methods correspond
Investigate the relationship rather than treating bibliographic differences as evidence of independence.
If the journal article revises the result used in your review
Determine which report should supply the result and document why, rather than including both estimates as independent studies.
If the preprint contains unique relevant information absent from the article
Retain that information with clear attribution to the preprint while keeping both reports linked to one study.
If you cannot establish whether the documents describe the same study
Keep the relationship provisional and compare additional study characteristics before assuming either duplication or independence.

The goal is not to privilege one publication format reflexively. It is to ensure that multiple reports from one study remain one underlying study while preserving whatever information the reports legitimately contribute.

07 · A Quick Checklist

How to Check a Preprint Against a Published Article

Before treating the reports as independent studies, check:
Trial registrations, protocols, study acronyms, cohort names, grants, or other study-specific identifiers.
Authors, institutions, research groups, and corresponding authors, allowing for changes between versions.
Recruitment sites, source population, dates, eligibility criteria, and participant characteristics.
Interventions, exposures, comparators, measurements, and follow-up periods.
Whether the preprint platform or journal provides an explicit link between the versions.
Changes in sample size, exclusions, outcome definitions, statistical models, and effect estimates.
Whether the published article corrects, updates, or supersedes a result you previously extracted from the preprint.
Whether unique information from the preprint should remain in the study record even when the journal article becomes the main results source.
Whether your final study count includes the underlying investigation only once.
08 · Frequently Asked Questions

Questions About Preprints and Published Versions

Is a preprint considered a separate report?

Yes. PRISMA 2020 explicitly includes preprints within its definition of study reports. A preprint and journal article may therefore be two reports while still describing one underlying study.

Should I delete the preprint after finding the published article?

Not before confirming the relationship and comparing relevant information. You may ultimately use the journal article as the main source for results, but retaining the preprint as a linked report preserves the version history and any unique information it contains.

Can the sample size change between a preprint and publication?

Yes. Revised exclusions, continuing recruitment, additional follow-up, data cleaning, or changes in the analytic population can alter the reported sample. Investigate the reason rather than assuming a different study.

What if the published result differs from the preprint?

Compare the participant population, outcome definition, analysis, missing-data handling, and any stated corrections. Document the difference and use a defensible source-selection rule rather than entering both estimates as independent evidence.

Does a peer-reviewed version always take precedence?

It will often be the more complete and updated source, but publication status alone is not a universal rule for every data item. A preprint can contain relevant information absent from the journal article, so the sources should be compared rather than ranked mechanically.

What if the preprint was never published in a journal?

Publication status is separate from study existence. Apply the eligibility, data-sufficiency, and risk-of-bias procedures specified for your review rather than assuming that the absence of journal publication makes the underlying study nonexistent.

Can several preprints and journal papers all come from one study?

Yes. A study may have multiple manuscript versions and multiple outcome-specific publications. The number of documents should therefore not be used as a shortcut for the number of independent studies.

09 · The Bottom Line

Publication Version Is Not Study Identity

The Bottom Line

A preprint and a published journal article can report the same underlying study, so link the versions using study-level characteristics and count the investigation only once rather than treating each document as independent evidence.

Compare the versions before choosing which source supplies your results because participant counts, methods, analyses, and conclusions can change. Preserve useful information and the version history while preventing the publication process itself from multiplying the apparent number of studies.

10 · Sources and Further Reading

Authoritative Guidance on Preprints and Multiple Study Reports

11 · Cite this Guide

How to Cite This Guide

This guide is intended to be read, shared, and used in research, teaching, and academic work. If you draw on its ideas, explanations, or other content, please acknowledge the source by citing the guide. Doing so gives appropriate credit and helps your readers locate the original resource.

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